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Structural Biology
Current Research Interests
The focus of our laboratory is three- fold:
1. Computational genome mining:
Analyse genomes computationally and explore interesting prope
rties of
proteins encoded therein. The major interest is in mining the Mycobacterium
tuberculosis genome. This goal also includes assigning functional role to the OR
Fans (ORF's whose function
is unknown), and analyse them phylogenetically. Our approach in assigning
functional role to the ORFans is based on high throughput threading of sequences
into known protein folds,
and generate hypotheses regarding functions based on three-dimensional
structural similarities. Functional domains in ORFans are sought to be identifie
d through this structure based
approach. Methodologies for developing better threading algorithms are proposed
to
be developed.
2. Identification of novel drug targets:
Attempt to identify novel drug targets of M. tuberculosis with the
help of computational analysis complemented by experimental work. Characterize
these drug targets biochemically and later in their structural details using X-ray crystallography as the
primary tool. Set up screens for rapid evaluation of inhibitors.
3. Stress proteins and chaperones:
Understand the structure- function properties of stress proteins. Of
particular interest are molecular chaperones and their genetic regulators.
Through this work, we also aim to address fundamental problems such as chaperone- assisted and/or spontaneous
protein folding.
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PROJECTS
Structural studies of
M. tuberculosis chaperonins.
Structural and functional
studies on M. tuberculosis inositol-1-phosphate synthase.
Structural and functional
studies on M. tuberculosis inositol-1-phosphate synthase.
Computationally analyse all
the proteins of M. tuberculosis
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Dr.Shekhar C. Mande
Structural Biology Group
Publications
Course Work Classes
CONTACT INFORMATION
Email :
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shekhar@cdfd.org.in
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Phone :
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+91-40-27171442, 27151344-46-47-48 extn.1400
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Fax :
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+91-40-27155610
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Last updated on : 7th June, 2006. |