Rajesh V, Singamsetti VK, Vidya S, Gowrishankar M, Elamaran M, Tripathi J,
Radhika NB, Kochar D, Ranjan A, Roy SK, Das A.(2008) Plasmodium falciparum: genetic polymorphism in apical membrane antigen-1 gene
from Indian isolates. Exp Parasitol. 119:144-51.
Vindal V, Ashwantha Kumar E, Ranjan A.(2008)Identification of operator sites within the upstream region of the putative mce2R
gene from mycobacteria.FEBS Lett. 582(7):1117-22.
Hussain MA, Naveed SA, Sechi LA, Ranjan S, Alvi A, Ahmed I, Ranjan A,
Mukhopadhyay S, Ahmed N. (2008) Isocitrate dehydrogenase of Helicobacter pylori potentially induces humoral
immune response in subjects with peptic ulcer disease and gastritis.
PLoS ONE. 3(1):e1481.
Akhter Y, Yellaboina S, Farhana A, Ranjan A, Ahmed N, Hasnain SE.(2008)
Genome scale portrait of cAMP-receptor protein (CRP) regulons in mycobacteria
points to their role in pathogenesis.Gene.407:148-58.
Vindal V, Suma K, Ranjan A.(2007)GntR family of regulators in Mycobacterium smegmatis: a sequence and structure
based characterization.BMC Genomics. 8:289.
Saxena V, Garg S, Ranjan S, Kochar D, Ranjan A, Das A.(2007)
Analysis of elongation factor Tu (tuf A) of apicoplast from Indian Plasmodium
vivax isolates. Infect Genet Evol. 7(5):618-26.
Ahmed N, Majeed AA, Ahmed I, Hussain MA, Alvi A, Devi SM, Rizwan M, Ranjan A,
Sechi LA, Mégraud F. (2007) genoBASE pylori: a genotype search tool and database of the human gastric
pathogen Helicobacter pylori. Infect Genet Evol. 7:463-8.
Vidyasagar, M. ..., Ranjan A. ... et al (2007) BioSuite: A
comprehensive bioinformatics software package (A unique
industry-academia collaboration) Current Science, 92, 29-38.
Ahmed N, Majeed AA, Ahmed I, Hussain MA, Alvi A, Manjulata
Devi S, Rizwan M, Ranjan A, Sechi L A and Mraud F (2007) genoBASE
pylori: A genotype search tool and database of the human gastric
pathogen Helicobacter pylori Infection, Genetics and Evolution,
4:463-468.
Vindal V, Ranjan S and Ranjan A (2006) In silico Analysis and
Classification of Mycobacterium tuberculosis putative GntR
transcription regulators. Tuberculosis 87:242-247.
Ranjan S, Gundu RK and Ranjan A (2006) MycoperonDB: A database
of computationally identified operons and transcriptional units in
Mycobacteria. BMC Bioinformatics 7 (S2) : S5
Ranjan S, Seshadri J, Vindal V, Yellaboina S and Ranjan A
(2006) iCR: A web tool to identify conserved targets of a regulatory
protein across the prokaryotic species. Nucleic Acids Res. 34, W584-
W587.
Yellaboina S, Ranjan S, Vindal V, and Ranjan A
(2006)
Comparative analysis of Iron regulated genes in mycobacteria FEBS
Letters,
580: 2567–2576.
Ranjan S, Yellaboina S, and Ranjan A (2006) IdeR:
From
target recognition to physiological functions Critical Reviews
in Microbiology,
32: 69–75.
Prakash P, Yellaboina S, Ranjan A, and Hasnain S.E.
(2005)
Computational prediction and experimental verification of novel IdeR
binding
sites in the upstream sequences of Mycobacterium tuberculosis ORFs Bioinformatics
21: 2161-2166.
Vijay Kumar S, Ranjan S, Saxena V, Rajesh V, Roy SK, Kochar
D,
Ranjan A, Das A. (2005) Plasmodium falciparum: genetic diversity
of
C-terminal region of MSP-1 in isolates from Indian sub-continent. Exp
Parasitol. 110: 384-388.
Yellaboina S., Ranjan S., Chakhaiyar P.,
Hasnain
SE., and Ranjan A. (2004) Prediction of DtxR regulon:
Identification
of binding sites and operons controlled by Diphtheria toxin repressor
in Corynebacterium diphtheriae. BMC Microbiology
4:38
Yellaboina S., Seshadri J., Senthil
Kumar M and Ranjan A. (2004) Predictregulon: A webserver for
the prediction
of the regulatory protein binding sites and operons in prokaryote
genomes. Nucleic Acids Research 32, W318-320.
Yellaboina S., Chakhaiyar P., Hasnain
SE., and Ranjan A. (2003) Computational prediction of DtxR
regulon-A
Dissection of physiological process controlled by DtxR in Corynebacterium
species. Proceedings of IEEE Computational System Bioinformatics
Conference
442-443.**
Singh S., Pandey K., Chatopadhya R.,
Yazdani S.S.,
Lynn A., Bharadwaj A., Ranjan A., and Chitnis C. (2001)
Biochemical, biophysical and functional characterization of bacterially
expressed and refolded
receptor binding domain of Plasmodium vivax Duffy Binding protein. J.
Biol. Chem. 276, 17111-17116.
Ranjan A., and Chitnis
C. (1999)
Mapping of receptor binding site within the erythrocyte binding domain
of
Plasmodium vivax and Plasmodium knowlesi proteins involved in
erythrocyte
invasion. Proc. Nat. Acad of Sc., USA, 96, 14067-14072.
Chitnis C., Chatopadhya R.,
Okoyeh,J.N., Pandey
K., Ranjan A. and Singh S., (1998).A superfamily of Plasmodium
proteins involved in erythrocyte invasion and cytoadherence:
implications for malariavaccine development The Immunologist , Suppl 1, 193
Hasnain, S.E., Jain, A., Habib, S.,
Ghosh, S.,
Chatterji, U., Ramachandran, A., Das, P., Venkaiah, B., Pandey, S.,
Liang,
B., Ranjan, A., Natrajan, K., Azim, C.A. (1997)
Involvement
of host factors in transcription from baculovirus very late gene
promoters. Gene, 190, 113-118.
Awasthi, A.K., Jha, P.K., Ranjan,
A.
and Hasnain, S.E. (1997) Monitoring.recombinant baculovirus replication
in
Spodoptera litura (Lepidoptera:Noctuidae) larvae using firefly
luciferase
gene as reporter. Annuls of Entomology Society of America
90,
832-835.
Ranjan, A., and
Hasnain, S.E. (1995). Codon usage in the prototype baculovirus-
Autographa Californica
Nuclear polyhedrosis virus. Ind. J. Biochem. Biophys.,
32,
424-428.
Mishra, N., Habib, S., Ranjan,
A., Hasnain S.E. and Nath, I. (1996). Cloning and
expression of Mycobacterium
lepraeclpC gene. Gene, 172, 99-104.
Ranjan, A., and
Hasnain, S.E.
(1994). Influence of codon usage and translation initiation codon
context
in the AcNPV-based expression system: Computer analysis using
homologous
and heterologous genes. Virus Genes, 09, 149-153.
Hasnain, S.E., Nakhai, B., Ehtesham,
N.Z., Sridhar, P., Ranjan, A., Talwar, G.P., and Jha,
P.K. (1994). ß-Subunit
of human chorionic gonadotropin hormone and firefly luciferase
simultaneously synthesised in insect cells using a recombinant
baculovirus are differentially expressed and transported. DNA
and Cell Biology 13, 275-282.
Sridhar, P., Azim, C.A., Burma, S.,
Habib, S.,
Jain, A., Mukherjee, B., Ranjan, A., and Hasnain, S.E.
(1994) Baculovirus vector-mediated expression of heterologous genes in
insect cells. J. Biosciences, 19, 603-614.
ARTICLES IN BOOKS
- Jain, A., Ranjan, A.,
Chatterji, U.,
Das, P., Ghosh, S., Habib, S., Pandey, S., Ramachandran, A., Venkaiah,
B.,
and Hasnain, S.E. (1998) High level expression of heterologous genes in
insect
cells is not dependent on promoter alone in Invertebrate cell culture:
Novel Direction and Biotechnological Applications (Eds: Maramorosch K
and Mitsuhashi J) Science Publishers, Inc (USA) New Hampshire,
p221-227.*
- Habib, S., Burma, S., Chatterji, U.,
Das, P., Jain, A., Mukherjee, B., Natarajan, K., Ranjan, A.
and Hasnain S.E
. (1996) Transcriptional regulation of the AcNPV polyhedrin gene
promoter
in Current Developments in Animal Virology (Ed Wagner and S Jameel eds)
Oxford
and IBH Publishing Co. Pvt Ltd, New Delhi, India.*
*
Book Chapters
** Non peer-reviewed journals / supplements / proceedings
Dr. Akash Ranjan